Wednesday, 2 February 2011

dbSNP Batch Query Result

The result of your batch query is ready. Go to the link below to download your result.

ATTENTION: Please download your file within 48 hours or it will be deleted due to limited storage space on our server.
http://www.ncbi.nih.gov/SNP/ftpfile.cgi?FileID=110202095437

Wed Feb 2 10:38:55 EST 2011

dbSNP BATCH QUERY REPORT: CHROMOSOME RPT
============================================================
Total number of Submitted ID: 30000
============================================================
Total number of ID processed: 30000
============================================================
These rs have been merged (submitted_rs -> new_rs)
________________________________________________
1758848 845769
1952426 1681576
1952850 1652044
2275465 15669
2416013 2050965
2475165 150677
2756143 2182609
2761888 1241774
2765897 1312752
17127937 16999141
17129551 2228543
17129554 1042394
17211355 2228042
17239361 2854254
17853648 11552556
============================================================



####################### ASN AND XML SCHEMA UPDATE ########################
The ASN and XML schema for dbSNP Build 129 have major changes and updates.
The updated schema files are available at:
ASN ftp://ftp.ncbi.nih.gov/snp/specs/docsum_3.0.asn
XML ftp://ftp.ncbi.nih.gov/snp/specs/docsum_3.0.xsd
GenoExchange ftp://ftp.ncbi.nih.gov/snp/specs/genoex_1_4.xsd
##########################################################################

The result was gzip compressed and must be uncompressed for viewing. Uncompression utilities for most computers can be found at http://www.gzip.org/.

All dbSNP query results are plain text format. XML report data can be viewed in Windows environment using Internet Explorer with the following two steps:

1. Save the attachment to a local folder and extract with an uncompression utility. Make sure the extracted file has the extension ".xml"
2. Save the following XML xsd file to the same local folder. Make sure it has the original filename and extension.

RS DOCSUM XML: ftp://ftp.ncbi.nih.gov/snp/specs/docsum_3.0.xsd
GENOTYPE XML: ftp://ftp.ncbi.nih.gov/snp/specs/genoex_1_4.xsd

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