Friday, 30 April 2010

What's new for 'JKB_daily1' in PubMed

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Sender's message: Sepsis or genomics or altitude: JKB_daily1

Sent on Friday, 2010 Apr 30
Search (sepsis[MeSH Terms] OR septic shock[MeSH Terms] OR altitude[MeSH Terms] OR genomics[MeSH Terms] OR genetics[MeSH Terms] OR retrotransposons[MeSH Terms] OR macrophage[MeSH Terms]) AND ("2009/8/8"[Publication Date] : "3000"[Publication Date]) AND (("Science"[Journal] OR "Nature"[Journal] OR "The New England journal of medicine"[Journal] OR "Lancet"[Journal] OR "Nature genetics"[Journal] OR "Nature medicine"[Journal]) OR (Hume DA[Author] OR Baillie JK[Author] OR Faulkner, Geoffrey J[Author]))
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PubMed Results
Items 1 - 2 of 2

1. Nature. 2010 Mar 18;464(7287):367-73.

Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium.

Ma LJ, van der Does HC, Borkovich KA, Coleman JJ, Daboussi MJ, Di Pietro A, Dufresne M, Freitag M, Grabherr M, Henrissat B, Houterman PM, Kang S, Shim WB, Woloshuk C, Xie X, Xu JR, Antoniw J, Baker SE, Bluhm BH, Breakspear A, Brown DW, Butchko RA, Chapman S, Coulson R, Coutinho PM, Danchin EG, Diener A, Gale LR, Gardiner DM, Goff S, Hammond-Kosack KE, Hilburn K, Hua-Van A, Jonkers W, Kazan K, Kodira CD, Koehrsen M, Kumar L, Lee YH, Li L, Manners JM, Miranda-Saavedra D, Mukherjee M, Park G, Park J, Park SY, Proctor RH, Regev A, Ruiz-Roldan MC, Sain D, Sakthikumar S, Sykes S, Schwartz DC, Turgeon BG, Wapinski I, Yoder O, Young S, Zeng Q, Zhou S, Galagan J, Cuomo CA, Kistler HC, Rep M.

The Broad Institute, Cambridge, Massachusetts 02141, USA.

Abstract

Fusarium species are among the most important phytopathogenic and toxigenic fungi. To understand the molecular underpinnings of pathogenicity in the genus Fusarium, we compared the genomes of three phenotypically diverse species: Fusarium graminearum, Fusarium verticillioides and Fusarium oxysporum f. sp. lycopersici. Our analysis revealed lineage-specific (LS) genomic regions in F. oxysporum that include four entire chromosomes and account for more than one-quarter of the genome. LS regions are rich in transposons and genes with distinct evolutionary profiles but related to pathogenicity, indicative of horizontal acquisition. Experimentally, we demonstrate the transfer of two LS chromosomes between strains of F. oxysporum, converting a non-pathogenic strain into a pathogen. Transfer of LS chromosomes between otherwise genetically isolated strains explains the polyphyletic origin of host specificity and the emergence of new pathogenic lineages in F. oxysporum. These findings put the evolution of fungal pathogenicity into a new perspective.

PMID: 20237561 [PubMed - indexed for MEDLINE]
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Publication Types:

  • Comparative Study
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH Terms:

  • Chromosomes, Fungal/genetics*
  • Evolution, Molecular
  • Fusarium/classification
  • Fusarium/genetics*
  • Fusarium/pathogenicity*
  • Genome, Fungal/genetics*
  • Genomics*
  • Host-Parasite Interactions/genetics
  • Multigene Family/genetics
  • Phenotype
  • Phylogeny
  • Proteome/genetics
  • Sequence Analysis, DNA
  • Synteny/genetics
  • Virulence/genetics

Substances:

  • Proteome
2. Nature. 2010 Mar 18;464(7287):355.

Q&A: Hervé This on flavour and perception. Interview by Michael White.

This H.
PMID: 20237550 [PubMed - indexed for MEDLINE]
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Publication Types:

  • Interview

MeSH Terms:

  • Animals
  • Cookery/instrumentation
  • Cookery/methods*
  • Flavoring Agents/isolation & purification
  • Geography
  • Humans
  • Meat/analysis
  • Molecular Biology/trends
  • Odors/analysis
  • Smell
  • Taste*
  • Temperature
  • Turkeys

Substances:

  • Flavoring Agents

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